Guided interactive image segmentation using machine learning and color-based data set clustering

TiQuant is a freely available modular image processing and quantification software. It includes a tool for interactive segmentation of two- and three-dimensional images using superpixels and machine learning, as well as a method for grouping sets of images into visually similar subsets to guide the reuse of interactively trained classifiers. Furthermore, TiQuant provides a variety of specialized processing chains for segmenting liver tissue compartments from three-dimensional confocal micrographs such as hepatocytes, nuclei, capillaries, and bile ducts, and corresponding quantification methods that allow measuring crucial features of liver tissue architecture. Download TiQuant for Windows Download TiQuant for Linux Download test data Download user manual